WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54E5A.8a Sequence Name  Y54E5A.8a
Length (nt)  759   Chromosome Location  I: 14716763-14716835
Chromosome . Primary Identifier  I Chromosome Location . Start  14716763
Chromosome Location . End  14716835
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E5A.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50246 Y54E5A.8, isoform a 28.0 252 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00057387
WBRNAi00020983
WBRNAi00037479

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E5A.8a 14716763 14716835 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013203 Y54E5A.8 Y54E5A.8 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E5A.8a 14716763 14716835 1
CDS:Y54E5A.8a 14717075 14717151 1
CDS:Y54E5A.8a 14717396 14717518 1
CDS:Y54E5A.8a 14717566 14717679 1
CDS:Y54E5A.8a 14718238 14718511 1
CDS:Y54E5A.8a 14718888 14718985 1

1 Sequence

Length
759

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E5A.8a.1 Y54E5A.8a.1 966   I: 14716598-14719027