WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K05C4.11.1 Sequence Name  K05C4.11.1
Length (nt)  1474   Chromosome Location  I: 14721766-14724739
Chromosome . Primary Identifier  I Chromosome Location . Start  14721766
Chromosome Location . End  14724739 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05C4.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010587 sol-2 K05C4.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05C4.11 K05C4.11 1311   I: 14721921-14722126

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K05C4.11.1 14721766 14724739 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36443   361   I: 14721766-14722126 Caenorhabditis elegans
Exon36445   106   I: 14722171-14722276 Caenorhabditis elegans
Exon36447   479   I: 14722715-14723193 Caenorhabditis elegans
Exon36449   84   I: 14724024-14724107 Caenorhabditis elegans
Exon36451   336   I: 14724244-14724579 Caenorhabditis elegans
Exon36453   108   I: 14724632-14724739 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K05C4.11.1 14721766 14724739 -1

1 Sequence

Length
1474

1 Sequence Ontology Term

Identifier Name Description
transcript