WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K05C4.6a.1 Sequence Name  K05C4.6a.1
Length (nt)  2186   Chromosome Location  I: 14739591-14742671
Chromosome . Primary Identifier  I Chromosome Location . Start  14739591
Chromosome Location . End  14742671 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05C4.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001979 hmp-2 K05C4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05C4.6a K05C4.6a 2037   I: 14739591-14739630

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K05C4.6a.1 14739591 14742671 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36486   40   I: 14739591-14739630 Caenorhabditis elegans
Exon36487   663   I: 14739688-14740350 Caenorhabditis elegans
Exon36489   165   I: 14740458-14740622 Caenorhabditis elegans
Exon36492   992   I: 14740963-14741954 Caenorhabditis elegans
Exon36495   326   I: 14742346-14742671 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K05C4.6a.1 14739591 14742671 1

1 Sequence

Length
2186

1 Sequence Ontology Term

Identifier Name Description
transcript