WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K05C4.3.2 Sequence Name  K05C4.3.2
Length (nt)  2083   Chromosome Location  I: 14748620-14753762
Chromosome . Primary Identifier  I Chromosome Location . Start  14748620
Chromosome Location . End  14753762 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05C4.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010580 K05C4.3 K05C4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05C4.3 K05C4.3 1260   I: 14749497-14749683

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K05C4.3.2 14748620 14753762 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36540   480   I: 14748620-14749099 Caenorhabditis elegans
Exon36542   480   I: 14749204-14749683 Caenorhabditis elegans
Exon36544   295   I: 14751408-14751702 Caenorhabditis elegans
Exon36546   158   I: 14751753-14751910 Caenorhabditis elegans
Exon36548   185   I: 14751967-14752151 Caenorhabditis elegans
Exon36550   116   I: 14752199-14752314 Caenorhabditis elegans
Exon36552   261   I: 14752775-14753035 Caenorhabditis elegans
Exon36554   62   I: 14753081-14753142 Caenorhabditis elegans
Exon36555   46   I: 14753717-14753762 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K05C4.3.2 14748620 14753762 -1

1 Sequence

Length
2083

1 Sequence Ontology Term

Identifier Name Description
transcript