WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39B2.4a.1 Sequence Name  F39B2.4a.1
Length (nt)  4907   Chromosome Location  I: 14777142-14787804
Chromosome . Primary Identifier  I Chromosome Location . Start  14777142
Chromosome Location . End  14787804 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39B2.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006349 sur-2 F39B2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39B2.4a F39B2.4a 4764   I: 14777277-14777402

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F39B2.4a.1 14777142 14787804 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36596   261   I: 14777142-14777402 Caenorhabditis elegans
Exon36597   423   I: 14778050-14778472 Caenorhabditis elegans
Exon36599   465   I: 14778905-14779369 Caenorhabditis elegans
Exon36601   282   I: 14779856-14780137 Caenorhabditis elegans
Exon36603   615   I: 14780686-14781300 Caenorhabditis elegans
Exon36605   153   I: 14781349-14781501 Caenorhabditis elegans
Exon36607   112   I: 14781552-14781663 Caenorhabditis elegans
Exon36609   214   I: 14781712-14781925 Caenorhabditis elegans
Exon36611   493   I: 14782338-14782830 Caenorhabditis elegans
Exon36613   368   I: 14783063-14783430 Caenorhabditis elegans
Exon36615   121   I: 14783771-14783891 Caenorhabditis elegans
Exon36617   268   I: 14784380-14784647 Caenorhabditis elegans
Exon36619   173   I: 14785471-14785643 Caenorhabditis elegans
Exon36621   264   I: 14785699-14785962 Caenorhabditis elegans
Exon36623   382   I: 14786961-14787342 Caenorhabditis elegans
Exon36625   194   I: 14787427-14787620 Caenorhabditis elegans
Exon36628   119   I: 14787686-14787804 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F39B2.4a.1 14777142 14787804 -1

1 Sequence

Length
4907

1 Sequence Ontology Term

Identifier Name Description
transcript