WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54E5B.3a Sequence Name  Y54E5B.3a
Length (nt)  762   Chromosome Location  I: 14820424-14820514
Chromosome . Primary Identifier  I Chromosome Location . Start  14820424
Chromosome Location . End  14820514
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E5B.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19227 LET-49, isoform a 29.1 253 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00026850
WBRNAi00026851
WBRNAi00057390
WBRNAi00112420
WBRNAi00065133
WBRNAi00093816
WBRNAi00087232
WBRNAi00081390
WBRNAi00037480
WBRNAi00093819
WBRNAi00093813
WBRNAi00000137
WBRNAi00112411
WBRNAi00085238
WBRNAi00116448

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E5B.3a 14820424 14820514 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002324 let-49 Y54E5B.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E5B.3a 14820424 14820514 1
CDS:Y54E5B.3a 14820637 14820724 1
CDS:Y54E5B.3a 14820849 14821068 1
CDS:Y54E5B.3a 14821123 14821193 1
CDS:Y54E5B.3a 14821250 14821541 1

1 Sequence

Length
762

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E5B.3a.1 Y54E5B.3a.1 884   I: 14820412-14821651