WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK270.2a.1 Sequence Name  ZK270.2a.1
Length (nt)  14171   Chromosome Location  I: 14875823-14897367
Chromosome . Primary Identifier  I Chromosome Location . Start  14875823
Chromosome Location . End  14897367 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK270.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001488 frm-1 ZK270.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK270.2a ZK270.2a 13593   I: 14876396-14876485

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK270.2a.1 14875823 14897367 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36875   663   I: 14875823-14876485 Caenorhabditis elegans
Exon36879   153   I: 14877198-14877350 Caenorhabditis elegans
Exon36883   277   I: 14877965-14878241 Caenorhabditis elegans
Exon36887   101   I: 14878893-14878993 Caenorhabditis elegans
Exon36893   123   I: 14881052-14881174 Caenorhabditis elegans
Exon36897   11688   I: 14882055-14893742 Caenorhabditis elegans
Exon36901   68   I: 14894576-14894643 Caenorhabditis elegans
Exon36905   167   I: 14894693-14894859 Caenorhabditis elegans
Exon36909   251   I: 14895186-14895436 Caenorhabditis elegans
Exon36913   398   I: 14895993-14896390 Caenorhabditis elegans
Exon36918   151   I: 14897032-14897182 Caenorhabditis elegans
Exon36923   131   I: 14897237-14897367 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK270.2a.1 14875823 14897367 -1

1 Sequence

Length
14171

1 Sequence Ontology Term

Identifier Name Description
transcript