WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK270.2d.1 Sequence Name  ZK270.2d.1
Length (nt)  14520   Chromosome Location  I: 14875823-14897362
Chromosome . Primary Identifier  I Chromosome Location . Start  14875823
Chromosome Location . End  14897362 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK270.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001488 frm-1 ZK270.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK270.2d ZK270.2d 13947   I: 14876396-14876485

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK270.2d.1 14875823 14897362 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36913   663   I: 14875823-14876485 Caenorhabditis elegans
Exon36918   153   I: 14877198-14877350 Caenorhabditis elegans
Exon36922   277   I: 14877965-14878241 Caenorhabditis elegans
Exon36926   101   I: 14878893-14878993 Caenorhabditis elegans
Exon36928   117   I: 14880015-14880131 Caenorhabditis elegans
Exon36929   237   I: 14880610-14880846 Caenorhabditis elegans
Exon36932   123   I: 14881052-14881174 Caenorhabditis elegans
Exon36935   11688   I: 14882055-14893742 Caenorhabditis elegans
Exon36940   68   I: 14894576-14894643 Caenorhabditis elegans
Exon36944   167   I: 14894693-14894859 Caenorhabditis elegans
Exon36948   251   I: 14895186-14895436 Caenorhabditis elegans
Exon36952   398   I: 14895993-14896390 Caenorhabditis elegans
Exon36957   151   I: 14897032-14897182 Caenorhabditis elegans
Exon36959   126   I: 14897237-14897362 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK270.2d.1 14875823 14897362 -1

1 Sequence

Length
14520

1 Sequence Ontology Term

Identifier Name Description
transcript