WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK270.1.2 Sequence Name  ZK270.1.2
Length (nt)  3424   Chromosome Location  I: 14906792-14913082
Chromosome . Primary Identifier  I Chromosome Location . Start  14906792
Chromosome Location . End  14913082 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK270.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004237 ptr-23 ZK270.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK270.1 ZK270.1 2952   I: 14909277-14909361

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK270.1.2 14906792 14913082 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36965   125   I: 14906792-14906916 Caenorhabditis elegans
Exon36966   122   I: 14909240-14909361 Caenorhabditis elegans
Exon36969   428   I: 14909422-14909849 Caenorhabditis elegans
Exon36971   181   I: 14909894-14910074 Caenorhabditis elegans
Exon36973   471   I: 14910124-14910594 Caenorhabditis elegans
Exon36975   706   I: 14910644-14911349 Caenorhabditis elegans
Exon36977   101   I: 14911394-14911494 Caenorhabditis elegans
Exon36979   184   I: 14911545-14911728 Caenorhabditis elegans
Exon36981   117   I: 14911781-14911897 Caenorhabditis elegans
Exon36983   311   I: 14911952-14912262 Caenorhabditis elegans
Exon36985   143   I: 14912311-14912453 Caenorhabditis elegans
Exon36987   115   I: 14912501-14912615 Caenorhabditis elegans
Exon36988   420   I: 14912663-14913082 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK270.1.2 14906792 14913082 1

1 Sequence

Length
3424

1 Sequence Ontology Term

Identifier Name Description
transcript