WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK270.1.1 Sequence Name  ZK270.1.1
Length (nt)  3300   Chromosome Location  I: 14909240-14913083
Chromosome . Primary Identifier  I Chromosome Location . Start  14909240
Chromosome Location . End  14913083 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK270.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004237 ptr-23 ZK270.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK270.1 ZK270.1 2952   I: 14909277-14909361

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK270.1.1 14909240 14913083 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36967   122   I: 14909240-14909361 Caenorhabditis elegans
Exon36968   428   I: 14909422-14909849 Caenorhabditis elegans
Exon36970   181   I: 14909894-14910074 Caenorhabditis elegans
Exon36972   471   I: 14910124-14910594 Caenorhabditis elegans
Exon36974   706   I: 14910644-14911349 Caenorhabditis elegans
Exon36976   101   I: 14911394-14911494 Caenorhabditis elegans
Exon36978   184   I: 14911545-14911728 Caenorhabditis elegans
Exon36980   117   I: 14911781-14911897 Caenorhabditis elegans
Exon36982   311   I: 14911952-14912262 Caenorhabditis elegans
Exon36984   143   I: 14912311-14912453 Caenorhabditis elegans
Exon36986   115   I: 14912501-14912615 Caenorhabditis elegans
Exon36989   421   I: 14912663-14913083 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK270.1.1 14909240 14913083 1

1 Sequence

Length
3300

1 Sequence Ontology Term

Identifier Name Description
transcript