WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK337.1a.1 Sequence Name  ZK337.1a.1
Length (nt)  4911   Chromosome Location  I: 14994581-15001691
Chromosome . Primary Identifier  I Chromosome Location . Start  14994581
Chromosome Location . End  15001691 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK337.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013969 tep-1 ZK337.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK337.1a ZK337.1a 4527   I: 14994773-14994879

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK337.1a.1 14994581 15001691 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37127   144   I: 14994581-14994724 Caenorhabditis elegans
Exon37132   109   I: 14994771-14994879 Caenorhabditis elegans
Exon37134   241   I: 14994989-14995229 Caenorhabditis elegans
Exon37139   253   I: 14995278-14995530 Caenorhabditis elegans
Exon37144   199   I: 14995578-14995776 Caenorhabditis elegans
Exon37149   214   I: 14995825-14996038 Caenorhabditis elegans
Exon37154   225   I: 14996085-14996309 Caenorhabditis elegans
Exon37159   342   I: 14996356-14996697 Caenorhabditis elegans
Exon37164   87   I: 14996748-14996834 Caenorhabditis elegans
Exon37169   405   I: 14996949-14997353 Caenorhabditis elegans
Exon37174   67   I: 14997403-14997469 Caenorhabditis elegans
Exon37180   139   I: 14997544-14997682 Caenorhabditis elegans
Exon37184   226   I: 14997730-14997955 Caenorhabditis elegans
Exon37189   587   I: 14998004-14998590 Caenorhabditis elegans
Exon37194   981   I: 14999166-15000146 Caenorhabditis elegans
Exon37199   163   I: 15000909-15001071 Caenorhabditis elegans
Exon37204   111   I: 15001116-15001226 Caenorhabditis elegans
Exon37212   418   I: 15001274-15001691 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK337.1a.1 14994581 15001691 1

1 Sequence

Length
4911

1 Sequence Ontology Term

Identifier Name Description
transcript