WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK337.1c.1 Sequence Name  ZK337.1c.1
Length (nt)  4874   Chromosome Location  I: 14994633-15001682
Chromosome . Primary Identifier  I Chromosome Location . Start  14994633
Chromosome Location . End  15001682 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK337.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013969 tep-1 ZK337.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK337.1c ZK337.1c 4551   I: 14994773-14994879

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK337.1c.1 14994633 15001682 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37128   92   I: 14994633-14994724 Caenorhabditis elegans
Exon37133   109   I: 14994771-14994879 Caenorhabditis elegans
Exon37137   241   I: 14994989-14995229 Caenorhabditis elegans
Exon37142   253   I: 14995278-14995530 Caenorhabditis elegans
Exon37147   199   I: 14995578-14995776 Caenorhabditis elegans
Exon37152   214   I: 14995825-14996038 Caenorhabditis elegans
Exon37157   225   I: 14996085-14996309 Caenorhabditis elegans
Exon37162   342   I: 14996356-14996697 Caenorhabditis elegans
Exon37167   87   I: 14996748-14996834 Caenorhabditis elegans
Exon37172   405   I: 14996949-14997353 Caenorhabditis elegans
Exon37177   91   I: 14997403-14997493 Caenorhabditis elegans
Exon37182   139   I: 14997544-14997682 Caenorhabditis elegans
Exon37187   226   I: 14997730-14997955 Caenorhabditis elegans
Exon37192   587   I: 14998004-14998590 Caenorhabditis elegans
Exon37197   981   I: 14999166-15000146 Caenorhabditis elegans
Exon37202   163   I: 15000909-15001071 Caenorhabditis elegans
Exon37207   111   I: 15001116-15001226 Caenorhabditis elegans
Exon37211   409   I: 15001274-15001682 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK337.1c.1 14994633 15001682 1

1 Sequence

Length
4874

1 Sequence Ontology Term

Identifier Name Description
transcript