WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK337.1b.1 Sequence Name  ZK337.1b.1
Length (nt)  4708   Chromosome Location  I: 14994668-15001682
Chromosome . Primary Identifier  I Chromosome Location . Start  14994668
Chromosome Location . End  15001682 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK337.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013969 tep-1 ZK337.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK337.1b ZK337.1b 4506   I: 14994773-14994879

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK337.1b.1 14994668 15001682 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37129   212   I: 14994668-14994879 Caenorhabditis elegans
Exon37136   241   I: 14994989-14995229 Caenorhabditis elegans
Exon37141   253   I: 14995278-14995530 Caenorhabditis elegans
Exon37146   199   I: 14995578-14995776 Caenorhabditis elegans
Exon37151   214   I: 14995825-14996038 Caenorhabditis elegans
Exon37156   225   I: 14996085-14996309 Caenorhabditis elegans
Exon37161   342   I: 14996356-14996697 Caenorhabditis elegans
Exon37166   87   I: 14996748-14996834 Caenorhabditis elegans
Exon37171   405   I: 14996949-14997353 Caenorhabditis elegans
Exon37176   67   I: 14997403-14997469 Caenorhabditis elegans
Exon37179   172   I: 14997511-14997682 Caenorhabditis elegans
Exon37186   226   I: 14997730-14997955 Caenorhabditis elegans
Exon37191   587   I: 14998004-14998590 Caenorhabditis elegans
Exon37196   981   I: 14999166-15000146 Caenorhabditis elegans
Exon37201   163   I: 15000909-15001071 Caenorhabditis elegans
Exon37206   111   I: 15001116-15001226 Caenorhabditis elegans
Exon37209   115   I: 15001274-15001388 Caenorhabditis elegans
Exon37214   108   I: 15001575-15001682 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK337.1b.1 14994668 15001682 1

1 Sequence

Length
4708

1 Sequence Ontology Term

Identifier Name Description
transcript