WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK337.1a.2 Sequence Name  ZK337.1a.2
Length (nt)  4831   Chromosome Location  I: 14994707-15001691
Chromosome . Primary Identifier  I Chromosome Location . Start  14994707
Chromosome Location . End  15001691 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK337.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013969 tep-1 ZK337.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK337.1a ZK337.1a 4527   I: 14994773-14994879

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK337.1a.2 14994707 15001691 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37130   173   I: 14994707-14994879 Caenorhabditis elegans
Exon37135   241   I: 14994989-14995229 Caenorhabditis elegans
Exon37140   253   I: 14995278-14995530 Caenorhabditis elegans
Exon37145   199   I: 14995578-14995776 Caenorhabditis elegans
Exon37150   214   I: 14995825-14996038 Caenorhabditis elegans
Exon37155   225   I: 14996085-14996309 Caenorhabditis elegans
Exon37160   342   I: 14996356-14996697 Caenorhabditis elegans
Exon37165   87   I: 14996748-14996834 Caenorhabditis elegans
Exon37170   405   I: 14996949-14997353 Caenorhabditis elegans
Exon37175   67   I: 14997403-14997469 Caenorhabditis elegans
Exon37181   139   I: 14997544-14997682 Caenorhabditis elegans
Exon37185   226   I: 14997730-14997955 Caenorhabditis elegans
Exon37190   587   I: 14998004-14998590 Caenorhabditis elegans
Exon37195   981   I: 14999166-15000146 Caenorhabditis elegans
Exon37200   163   I: 15000909-15001071 Caenorhabditis elegans
Exon37205   111   I: 15001116-15001226 Caenorhabditis elegans
Exon37213   418   I: 15001274-15001691 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK337.1a.2 14994707 15001691 1

1 Sequence

Length
4831

1 Sequence Ontology Term

Identifier Name Description
transcript