WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK337.1c.2 Sequence Name  ZK337.1c.2
Length (nt)  4811   Chromosome Location  I: 14994738-15001678
Chromosome . Primary Identifier  I Chromosome Location . Start  14994738
Chromosome Location . End  15001678 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK337.1c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013969 tep-1 ZK337.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK337.1c ZK337.1c 4551   I: 14994773-14994879

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK337.1c.2 14994738 15001678 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37131   142   I: 14994738-14994879 Caenorhabditis elegans
Exon37138   241   I: 14994989-14995229 Caenorhabditis elegans
Exon37143   253   I: 14995278-14995530 Caenorhabditis elegans
Exon37148   199   I: 14995578-14995776 Caenorhabditis elegans
Exon37153   214   I: 14995825-14996038 Caenorhabditis elegans
Exon37158   225   I: 14996085-14996309 Caenorhabditis elegans
Exon37163   342   I: 14996356-14996697 Caenorhabditis elegans
Exon37168   87   I: 14996748-14996834 Caenorhabditis elegans
Exon37173   405   I: 14996949-14997353 Caenorhabditis elegans
Exon37178   91   I: 14997403-14997493 Caenorhabditis elegans
Exon37183   139   I: 14997544-14997682 Caenorhabditis elegans
Exon37188   226   I: 14997730-14997955 Caenorhabditis elegans
Exon37193   587   I: 14998004-14998590 Caenorhabditis elegans
Exon37198   981   I: 14999166-15000146 Caenorhabditis elegans
Exon37203   163   I: 15000909-15001071 Caenorhabditis elegans
Exon37208   111   I: 15001116-15001226 Caenorhabditis elegans
Exon37210   405   I: 15001274-15001678 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK337.1c.2 14994738 15001678 1

1 Sequence

Length
4811

1 Sequence Ontology Term

Identifier Name Description
transcript