WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33H2.5.1 Sequence Name  F33H2.5.1
Length (nt)  6562   Chromosome Location  I: 15005603-15013904
Chromosome . Primary Identifier  I Chromosome Location . Start  15005603
Chromosome Location . End  15013904 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33H2.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009368 pole-1 F33H2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33H2.5 F33H2.5 6435   I: 15005700-15005867

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33H2.5.1 15005603 15013904 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37219   265   I: 15005603-15005867 Caenorhabditis elegans
Exon37220   102   I: 15005920-15006021 Caenorhabditis elegans
Exon37221   134   I: 15006071-15006204 Caenorhabditis elegans
Exon37222   91   I: 15007074-15007164 Caenorhabditis elegans
Exon37223   315   I: 15007213-15007527 Caenorhabditis elegans
Exon37224   466   I: 15007592-15008057 Caenorhabditis elegans
Exon37225   1701   I: 15008108-15009808 Caenorhabditis elegans
Exon37226   566   I: 15010020-15010585 Caenorhabditis elegans
Exon37227   566   I: 15010633-15011198 Caenorhabditis elegans
Exon37228   345   I: 15011245-15011589 Caenorhabditis elegans
Exon37229   103   I: 15011657-15011759 Caenorhabditis elegans
Exon37230   247   I: 15011806-15012052 Caenorhabditis elegans
Exon37231   620   I: 15012100-15012719 Caenorhabditis elegans
Exon37232   331   I: 15012768-15013098 Caenorhabditis elegans
Exon37233   639   I: 15013151-15013789 Caenorhabditis elegans
Exon37234   71   I: 15013834-15013904 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33H2.5.1 15005603 15013904 -1

1 Sequence

Length
6562

1 Sequence Ontology Term

Identifier Name Description
transcript