WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33H2.1.1 Sequence Name  F33H2.1.1
Length (nt)  3152   Chromosome Location  I: 15017283-15022990
Chromosome . Primary Identifier  I Chromosome Location . Start  15017283
Chromosome Location . End  15022990 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33H2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001049 dog-1 F33H2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33H2.1 F33H2.1 2952   I: 15017473-15017701

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33H2.1.1 15017283 15022990 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37240   419   I: 15017283-15017701 Caenorhabditis elegans
Exon37241   456   I: 15018517-15018972 Caenorhabditis elegans
Exon37242   89   I: 15019230-15019318 Caenorhabditis elegans
Exon37243   165   I: 15019756-15019920 Caenorhabditis elegans
Exon37244   124   I: 15019999-15020122 Caenorhabditis elegans
Exon37245   159   I: 15020173-15020331 Caenorhabditis elegans
Exon37246   149   I: 15020405-15020553 Caenorhabditis elegans
Exon37247   305   I: 15020782-15021086 Caenorhabditis elegans
Exon37248   295   I: 15021259-15021553 Caenorhabditis elegans
Exon37249   78   I: 15021700-15021777 Caenorhabditis elegans
Exon37250   103   I: 15021824-15021926 Caenorhabditis elegans
Exon37251   93   I: 15021972-15022064 Caenorhabditis elegans
Exon37252   127   I: 15022227-15022353 Caenorhabditis elegans
Exon37253   590   I: 15022401-15022990 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33H2.1.1 15017283 15022990 -1

1 Sequence

Length
3152

1 Sequence Ontology Term

Identifier Name Description
transcript