WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31C3.2b.1 Sequence Name  F31C3.2b.1
Length (nt)  2771   Chromosome Location  I: 15036009-15040487
Chromosome . Primary Identifier  I Chromosome Location . Start  15036009
Chromosome Location . End  15040487 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31C3.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009284 gldr-2 F31C3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31C3.2b F31C3.2b 2427   I: 15036377-15036503

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F31C3.2b.1 15036009 15040487 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37257   256   I: 15036009-15036264 Caenorhabditis elegans
Exon37260   129   I: 15036375-15036503 Caenorhabditis elegans
Exon37262   112   I: 15036553-15036664 Caenorhabditis elegans
Exon37265   187   I: 15036720-15036906 Caenorhabditis elegans
Exon37268   320   I: 15036951-15037270 Caenorhabditis elegans
Exon37271   269   I: 15037739-15038007 Caenorhabditis elegans
Exon37273   216   I: 15038053-15038268 Caenorhabditis elegans
Exon37277   628   I: 15038771-15039398 Caenorhabditis elegans
Exon37280   248   I: 15039547-15039794 Caenorhabditis elegans
Exon37283   193   I: 15039849-15040041 Caenorhabditis elegans
Exon37285   213   I: 15040275-15040487 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F31C3.2b.1 15036009 15040487 1

1 Sequence

Length
2771

1 Sequence Ontology Term

Identifier Name Description
transcript