WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31C3.2a.1 Sequence Name  F31C3.2a.1
Length (nt)  2562   Chromosome Location  I: 15036369-15040537
Chromosome . Primary Identifier  I Chromosome Location . Start  15036369
Chromosome Location . End  15040537 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31C3.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009284 gldr-2 F31C3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31C3.2a F31C3.2a 2418   I: 15036377-15036503

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F31C3.2a.1 15036369 15040537 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37258   135   I: 15036369-15036503 Caenorhabditis elegans
Exon37261   112   I: 15036553-15036664 Caenorhabditis elegans
Exon37264   187   I: 15036720-15036906 Caenorhabditis elegans
Exon37267   320   I: 15036951-15037270 Caenorhabditis elegans
Exon37270   269   I: 15037739-15038007 Caenorhabditis elegans
Exon37275   207   I: 15038062-15038268 Caenorhabditis elegans
Exon37276   628   I: 15038771-15039398 Caenorhabditis elegans
Exon37279   248   I: 15039547-15039794 Caenorhabditis elegans
Exon37282   193   I: 15039849-15040041 Caenorhabditis elegans
Exon37286   263   I: 15040275-15040537 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F31C3.2a.1 15036369 15040537 1

1 Sequence

Length
2562

1 Sequence Ontology Term

Identifier Name Description
transcript