WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31C3.6a.1 Sequence Name  F31C3.6a.1
Length (nt)  2081   Chromosome Location  I: 15053608-15058994
Chromosome . Primary Identifier  I Chromosome Location . Start  15053608
Chromosome Location . End  15058994 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31C3.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009288 F31C3.6 F31C3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31C3.6a F31C3.6a 1665   I: 15053794-15053899

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F31C3.6a.1 15053608 15058994 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37308   292   I: 15053608-15053899 Caenorhabditis elegans
Exon37310   175   I: 15053947-15054121 Caenorhabditis elegans
Exon37312   363   I: 15054635-15054997 Caenorhabditis elegans
Exon37314   103   I: 15055294-15055396 Caenorhabditis elegans
Exon37316   212   I: 15055442-15055653 Caenorhabditis elegans
Exon37318   130   I: 15056191-15056320 Caenorhabditis elegans
Exon37320   155   I: 15057311-15057465 Caenorhabditis elegans
Exon37322   108   I: 15057508-15057615 Caenorhabditis elegans
Exon37324   70   I: 15057764-15057833 Caenorhabditis elegans
Exon37325   122   I: 15058094-15058215 Caenorhabditis elegans
Exon37328   351   I: 15058644-15058994 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F31C3.6a.1 15053608 15058994 -1

1 Sequence

Length
2081

1 Sequence Ontology Term

Identifier Name Description
transcript