WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01A2.4a.2 Sequence Name  K01A2.4a.2
Length (nt)  1335   Chromosome Location  II: 307527-312725
Chromosome . Primary Identifier  II Chromosome Location . Start  307527
Chromosome Location . End  312725 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01A2.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019279 K01A2.4 K01A2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01A2.4a K01A2.4a 822   II: 307545-307597

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01A2.4a.2 307527 312725 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38556   71   II: 307527-307597 Caenorhabditis elegans
Exon38558   27   II: 307647-307673 Caenorhabditis elegans
Exon38560   42   II: 307926-307967 Caenorhabditis elegans
Exon38562   42   II: 308095-308136 Caenorhabditis elegans
Exon38564   39   II: 308317-308355 Caenorhabditis elegans
Exon38566   204   II: 308519-308722 Caenorhabditis elegans
Exon38569   119   II: 308769-308887 Caenorhabditis elegans
Exon38572   115   II: 308941-309055 Caenorhabditis elegans
Exon38575   79   II: 309200-309278 Caenorhabditis elegans
Exon38578   197   II: 309348-309544 Caenorhabditis elegans
Exon38608   400   II: 312326-312725 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01A2.4a.2 307527 312725 1

1 Sequence

Length
1335

1 Sequence Ontology Term

Identifier Name Description
transcript