WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41D7.2.2 Sequence Name  C41D7.2.2
Length (nt)  3002   Chromosome Location  II: 362484-367555
Chromosome . Primary Identifier  II Chromosome Location . Start  362484
Chromosome Location . End  367555 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41D7.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004218 ptr-3 C41D7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41D7.2 C41D7.2 2784   II: 362639-362800

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41D7.2.2 362484 367555 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38725   317   II: 362484-362800 Caenorhabditis elegans
Exon38728   579   II: 362854-363432 Caenorhabditis elegans
Exon38730   372   II: 363934-364305 Caenorhabditis elegans
Exon38732   321   II: 364353-364673 Caenorhabditis elegans
Exon38734   190   II: 364730-364919 Caenorhabditis elegans
Exon38736   200   II: 364971-365170 Caenorhabditis elegans
Exon38738   184   II: 365482-365665 Caenorhabditis elegans
Exon38740   128   II: 365714-365841 Caenorhabditis elegans
Exon38742   189   II: 365890-366078 Caenorhabditis elegans
Exon38744   228   II: 366145-366372 Caenorhabditis elegans
Exon38746   136   II: 366417-366552 Caenorhabditis elegans
Exon38748   97   II: 367330-367426 Caenorhabditis elegans
Exon38750   61   II: 367495-367555 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41D7.2.2 362484 367555 -1

1 Sequence

Length
3002

1 Sequence Ontology Term

Identifier Name Description
transcript