WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C41D7.2 Sequence Name  C41D7.2
Length (nt)  2784   Chromosome Location  II: 362639-362800
Chromosome . Primary Identifier  II Chromosome Location . Start  362639
Chromosome Location . End  362800
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41D7.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50723 PTR-3 104.9 927 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00001861
WBRNAi00042294
WBRNAi00076943
WBRNAi00076911
WBRNAi00003131
WBRNAi00029725
WBRNAi00077032
WBRNAi00076966
WBRNAi00023084
WBRNAi00023163
WBRNAi00023675
WBRNAi00023963

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C41D7.2 362639 362800 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004218 ptr-3 C41D7.2 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C41D7.2 362639 362800 -1
CDS:C41D7.2 362854 363432 -1
CDS:C41D7.2 363934 364305 -1
CDS:C41D7.2 364353 364673 -1
CDS:C41D7.2 364730 364919 -1
CDS:C41D7.2 364971 365170 -1
CDS:C41D7.2 365482 365665 -1
CDS:C41D7.2 365714 365841 -1
CDS:C41D7.2 365890 366078 -1
CDS:C41D7.2 366145 366372 -1
CDS:C41D7.2 366417 366552 -1
CDS:C41D7.2 367330 367424 -1

1 Sequence

Length
2784

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C41D7.2.2 C41D7.2.2 3002   II: 362484-367555
Transcript:C41D7.2.1 C41D7.2.1 3009   II: 362484-367553