WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03H5.3a.1 Sequence Name  C03H5.3a.1
Length (nt)  1143   Chromosome Location  II: 386088-387949
Chromosome . Primary Identifier  II Chromosome Location . Start  386088
Chromosome Location . End  387949 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03H5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015405 C03H5.3 C03H5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03H5.3a C03H5.3a 864   II: 386239-386242

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C03H5.3a.1 386088 387949 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38815   155   II: 386088-386242 Caenorhabditis elegans
Exon38816   41   II: 386294-386334 Caenorhabditis elegans
Exon38817   656   II: 386384-387039 Caenorhabditis elegans
Exon38820   291   II: 387659-387949 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C03H5.3a.1 386088 387949 1

1 Sequence

Length
1143

1 Sequence Ontology Term

Identifier Name Description
transcript