WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C24H12.5c.1 Sequence Name  C24H12.5c.1
Length (nt)  1879   Chromosome Location  II: 406142-410928
Chromosome . Primary Identifier  II Chromosome Location . Start  406142
Chromosome Location . End  410928 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24H12.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016074 dnsn-1 C24H12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24H12.5c C24H12.5c 1785   II: 406227-406397

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C24H12.5c.1 406142 410928 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38841   256   II: 406142-406397 Caenorhabditis elegans
Exon38846   96   II: 406455-406550 Caenorhabditis elegans
Exon38851   193   II: 406602-406794 Caenorhabditis elegans
Exon38856   292   II: 407739-408030 Caenorhabditis elegans
Exon38864   293   II: 408983-409275 Caenorhabditis elegans
Exon38869   119   II: 409324-409442 Caenorhabditis elegans
Exon38873   270   II: 410151-410420 Caenorhabditis elegans
Exon38874   100   II: 410476-410575 Caenorhabditis elegans
Exon38877   80   II: 410625-410704 Caenorhabditis elegans
Exon38878   180   II: 410749-410928 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C24H12.5c.1 406142 410928 -1

1 Sequence

Length
1879

1 Sequence Ontology Term

Identifier Name Description
transcript