WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07E8.7a.1 Sequence Name  K07E8.7a.1
Length (nt)  1389   Chromosome Location  II: 640991-650367
Chromosome . Primary Identifier  II Chromosome Location . Start  640991
Chromosome Location . End  650367 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07E8.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019498 K07E8.7 K07E8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07E8.7a K07E8.7a 1299   II: 641065-641358

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07E8.7a.1 640991 650367 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39407   368   II: 640991-641358 Caenorhabditis elegans
Exon39410   92   II: 641408-641499 Caenorhabditis elegans
Exon39413   191   II: 642057-642247 Caenorhabditis elegans
Exon39416   142   II: 643090-643231 Caenorhabditis elegans
Exon39419   154   II: 643278-643431 Caenorhabditis elegans
Exon39422   117   II: 643500-643616 Caenorhabditis elegans
Exon39425   122   II: 649764-649885 Caenorhabditis elegans
Exon39429   121   II: 650064-650184 Caenorhabditis elegans
Exon39431   33   II: 650230-650262 Caenorhabditis elegans
Exon39432   49   II: 650319-650367 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07E8.7a.1 640991 650367 -1

1 Sequence

Length
1389

1 Sequence Ontology Term

Identifier Name Description
transcript