WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28A10.5.1 Sequence Name  F28A10.5.1
Length (nt)  895   Chromosome Location  II: 849678-850667
Chromosome . Primary Identifier  II Chromosome Location . Start  849678
Chromosome Location . End  850667 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28A10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017873 F28A10.5 F28A10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28A10.5 F28A10.5 882   II: 849678-850079

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28A10.5.1 849678 850667 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39836   402   II: 849678-850079 Caenorhabditis elegans
Exon39837   383   II: 850127-850509 Caenorhabditis elegans
Exon39838   110   II: 850558-850667 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28A10.5.1 849678 850667 -1

1 Sequence

Length
895

1 Sequence Ontology Term

Identifier Name Description
transcript