WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M01D1.1a Sequence Name  M01D1.1a
Length (nt)  993   Chromosome Location  II: 1046505-1046684
Chromosome . Primary Identifier  II Chromosome Location . Start  1046505
Chromosome Location . End  1046684
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01D1.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21071 STR-148, isoform a 38.0 330 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00034342
WBRNAi00050735
WBRNAi00017091

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M01D1.1a 1046505 1046684 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006195 str-148 M01D1.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:M01D1.1a 1046505 1046684 1
CDS:M01D1.1a 1046737 1046821 1
CDS:M01D1.1a 1046867 1046945 1
CDS:M01D1.1a 1047291 1047425 1
CDS:M01D1.1a 1047536 1047677 1
CDS:M01D1.1a 1047725 1047853 1
CDS:M01D1.1a 1047909 1048086 1
CDS:M01D1.1a 1048132 1048196 1

1 Sequence

Length
993

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M01D1.1a.1 M01D1.1a.1 1629   II: 1045992-1048319