WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13B5.8b.1 Sequence Name  T13B5.8b.1
Length (nt)  785   Chromosome Location  II: 1121013-1123265
Chromosome . Primary Identifier  II Chromosome Location . Start  1121013
Chromosome Location . End  1123265 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13B5.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020475 sut-1 T13B5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13B5.8b T13B5.8b 708   II: 1121078-1121188

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13B5.8b.1 1121013 1123265 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40296   176   II: 1121013-1121188 Caenorhabditis elegans
Exon40299   218   II: 1121588-1121805 Caenorhabditis elegans
Exon40301   199   II: 1122668-1122866 Caenorhabditis elegans
Exon40303   85   II: 1122964-1123048 Caenorhabditis elegans
Exon40305   74   II: 1123099-1123172 Caenorhabditis elegans
Exon40307   33   II: 1123233-1123265 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13B5.8b.1 1121013 1123265 -1

1 Sequence

Length
785

1 Sequence Ontology Term

Identifier Name Description
transcript