WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T13B5.8b Sequence Name  T13B5.8b
Length (nt)  708   Chromosome Location  II: 1121078-1121188
Chromosome . Primary Identifier  II Chromosome Location . Start  1121078
Chromosome Location . End  1121188
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13B5.8b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE13617 SUT-1, isoform b 26.4 235 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00053251
WBRNAi00035533
WBRNAi00062536

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T13B5.8b 1121078 1121188 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020475 sut-1 T13B5.8 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T13B5.8b 1121078 1121188 -1
CDS:T13B5.8b 1121588 1121805 -1
CDS:T13B5.8b 1122668 1122866 -1
CDS:T13B5.8b 1122964 1123048 -1
CDS:T13B5.8b 1123099 1123172 -1
CDS:T13B5.8b 1123233 1123253 -1

1 Sequence

Length
708

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T13B5.8b.1 T13B5.8b.1 785   II: 1121013-1123265