WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09B6.1a.1 Sequence Name  W09B6.1a.1
Length (nt)  6840   Chromosome Location  II: 1136785-1152701
Chromosome . Primary Identifier  II Chromosome Location . Start  1136785
Chromosome Location . End  1152701 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09B6.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004076 pod-2 W09B6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09B6.1a W09B6.1a 6165   II: 1143936-1143989

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09B6.1a.1 1136785 1152701 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40420   74   II: 1136785-1136858 Caenorhabditis elegans
Exon40422   99   II: 1136949-1137047 Caenorhabditis elegans
Exon40425   148   II: 1140342-1140489 Caenorhabditis elegans
Exon40432   82   II: 1143908-1143989 Caenorhabditis elegans
Exon40437   96   II: 1144549-1144644 Caenorhabditis elegans
Exon40443   139   II: 1144920-1145058 Caenorhabditis elegans
Exon40449   1912   II: 1145655-1147566 Caenorhabditis elegans
Exon40455   178   II: 1147821-1147998 Caenorhabditis elegans
Exon40460   3545   II: 1148354-1151898 Caenorhabditis elegans
Exon40465   186   II: 1152017-1152202 Caenorhabditis elegans
Exon40475   381   II: 1152321-1152701 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09B6.1a.1 1136785 1152701 1

1 Sequence

Length
6840

1 Sequence Ontology Term

Identifier Name Description
transcript