WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53A10.2b.3 Sequence Name  F53A10.2b.3
Length (nt)  2305   Chromosome Location  II: 1211075-1230676
Chromosome . Primary Identifier  II Chromosome Location . Start  1211075
Chromosome Location . End  1230676 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53A10.2b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018734 F53A10.2 F53A10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53A10.2b F53A10.2b 1131   II: 1228351-1228515

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53A10.2b.3 1211075 1230676 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40483   99   II: 1211075-1211173 Caenorhabditis elegans
Exon40489   78   II: 1211355-1211432 Caenorhabditis elegans
Exon40496   99   II: 1225768-1225866 Caenorhabditis elegans
Exon40504   186   II: 1226111-1226296 Caenorhabditis elegans
Exon40512   420   II: 1227098-1227517 Caenorhabditis elegans
Exon40522   246   II: 1228270-1228515 Caenorhabditis elegans
Exon40531   545   II: 1228930-1229474 Caenorhabditis elegans
Exon40541   64   II: 1229646-1229709 Caenorhabditis elegans
Exon40551   215   II: 1229762-1229976 Caenorhabditis elegans
Exon40563   353   II: 1230324-1230676 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53A10.2b.3 1211075 1230676 1

1 Sequence

Length
2305

1 Sequence Ontology Term

Identifier Name Description
transcript