WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53A10.2b Sequence Name  F53A10.2b
Length (nt)  1131   Chromosome Location  II: 1228351-1228515
Chromosome . Primary Identifier  II Chromosome Location . Start  1228351
Chromosome Location . End  1228515
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53A10.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32671 F53A10.2, isoform b 41.9 376 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00015207
WBRNAi00032648
WBRNAi00063366
WBRNAi00063378

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53A10.2b 1228351 1228515 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018734 F53A10.2 F53A10.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53A10.2b 1228351 1228515 1
CDS:F53A10.2b 1228930 1229474 1
CDS:F53A10.2b 1229646 1229709 1
CDS:F53A10.2b 1229762 1229976 1
CDS:F53A10.2b 1230324 1230465 1

1 Sequence

Length
1131

1 Sequence Ontology Term

Identifier Name Description
CDS  

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53A10.2b.1 F53A10.2b.1 2760   II: 1201465-1230782
Transcript:F53A10.2b.3 F53A10.2b.3 2305   II: 1211075-1230676
Transcript:F53A10.2b.2 F53A10.2b.2 2900   II: 1224204-1230782
Transcript:F53A10.2b.4 F53A10.2b.4 2060   II: 1226109-1230705
Transcript:F53A10.2b.5 F53A10.2b.5 1339   II: 1228263-1230585