WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47F6.9a.1 Sequence Name  F47F6.9a.1
Length (nt)  1991   Chromosome Location  II: 1258934-1263049
Chromosome . Primary Identifier  II Chromosome Location . Start  1258934
Chromosome Location . End  1263049 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47F6.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023410 clpr-2 F47F6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47F6.9a F47F6.9a 1509   II: 1259365-1259390

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47F6.9a.1 1258934 1263049 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40625   457   II: 1258934-1259390 Caenorhabditis elegans
Exon40626   200   II: 1259438-1259637 Caenorhabditis elegans
Exon40627   76   II: 1259682-1259757 Caenorhabditis elegans
Exon40628   224   II: 1259862-1260085 Caenorhabditis elegans
Exon40629   175   II: 1260130-1260304 Caenorhabditis elegans
Exon40630   100   II: 1260353-1260452 Caenorhabditis elegans
Exon40631   188   II: 1260500-1260687 Caenorhabditis elegans
Exon40633   204   II: 1262120-1262323 Caenorhabditis elegans
Exon40635   151   II: 1262368-1262518 Caenorhabditis elegans
Exon40638   216   II: 1262834-1263049 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47F6.9a.1 1258934 1263049 1

1 Sequence

Length
1991

1 Sequence Ontology Term

Identifier Name Description
transcript