WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F47F6.9a Sequence Name  F47F6.9a
Length (nt)  1509   Chromosome Location  II: 1259365-1259390
Chromosome . Primary Identifier  II Chromosome Location . Start  1259365
Chromosome Location . End  1259390
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47F6.9a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51495 CLPR-2, isoform a 58.2 502 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047673
WBRNAi00015205
WBRNAi00032445

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F47F6.9a 1259365 1259390 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023410 clpr-2 F47F6.9 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F47F6.9a 1259365 1259390 1
CDS:F47F6.9a 1259438 1259637 1
CDS:F47F6.9a 1259682 1259757 1
CDS:F47F6.9a 1259862 1260085 1
CDS:F47F6.9a 1260130 1260304 1
CDS:F47F6.9a 1260353 1260452 1
CDS:F47F6.9a 1260500 1260687 1
CDS:F47F6.9a 1262120 1262323 1
CDS:F47F6.9a 1262368 1262518 1
CDS:F47F6.9a 1262834 1262998 1

1 Sequence

Length
1509

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F47F6.9a.1 F47F6.9a.1 1991   II: 1258934-1263049