WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G7A.5.1 Sequence Name  Y57G7A.5.1
Length (nt)  821   Chromosome Location  II: 1273169-1275539
Chromosome . Primary Identifier  II Chromosome Location . Start  1273169
Chromosome Location . End  1275539 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G7A.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021968 Y57G7A.5 Y57G7A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G7A.5 Y57G7A.5 735   II: 1273207-1273266

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G7A.5.1 1273169 1275539 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40694   98   II: 1273169-1273266 Caenorhabditis elegans
Exon40695   138   II: 1273313-1273450 Caenorhabditis elegans
Exon40696   120   II: 1273496-1273615 Caenorhabditis elegans
Exon40697   72   II: 1274185-1274256 Caenorhabditis elegans
Exon40698   226   II: 1274305-1274530 Caenorhabditis elegans
Exon40699   167   II: 1275373-1275539 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G7A.5.1 1273169 1275539 -1

1 Sequence

Length
821

1 Sequence Ontology Term

Identifier Name Description
transcript