WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G7A.12a.1 Sequence Name  Y57G7A.12a.1
Length (nt)  948   Chromosome Location  II: 1278650-1281039
Chromosome . Primary Identifier  II Chromosome Location . Start  1278650
Chromosome Location . End  1281039 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G7A.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023499 srz-63 Y57G7A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G7A.12a Y57G7A.12a 948   II: 1278650-1278778

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G7A.12a.1 1278650 1281039 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40704   129   II: 1278650-1278778 Caenorhabditis elegans
Exon40705   125   II: 1278827-1278951 Caenorhabditis elegans
Exon40706   271   II: 1279003-1279273 Caenorhabditis elegans
Exon40707   162   II: 1280246-1280407 Caenorhabditis elegans
Exon40709   261   II: 1280779-1281039 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G7A.12a.1 1278650 1281039 1

1 Sequence

Length
948

1 Sequence Ontology Term

Identifier Name Description
transcript