WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G7A.1.2 Sequence Name  Y57G7A.1.2
Length (nt)  453   Chromosome Location  II: 1298469-1299711
Chromosome . Primary Identifier  II Chromosome Location . Start  1298469
Chromosome Location . End  1299711 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G7A.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021965 Y57G7A.1 Y57G7A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G7A.1 Y57G7A.1 414   II: 1298509-1298610

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G7A.1.2 1298469 1299711 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40742   8   II: 1298469-1298476 Caenorhabditis elegans
Exon40743   117   II: 1298494-1298610 Caenorhabditis elegans
Exon40746   177   II: 1298659-1298835 Caenorhabditis elegans
Exon40748   57   II: 1299505-1299561 Caenorhabditis elegans
Exon40749   94   II: 1299618-1299711 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G7A.1.2 1298469 1299711 1

1 Sequence

Length
453

1 Sequence Ontology Term

Identifier Name Description
transcript