WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D12.6a.1 Sequence Name  F56D12.6a.1
Length (nt)  3155   Chromosome Location  II: 1310515-1320437
Chromosome . Primary Identifier  II Chromosome Location . Start  1310515
Chromosome Location . End  1320437 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D12.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018974 fcho-1 F56D12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D12.6a F56D12.6a 2907   II: 1310580-1310642

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56D12.6a.1 1310515 1320437 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40795   128   II: 1310515-1310642 Caenorhabditis elegans
Exon40797   120   II: 1311276-1311395 Caenorhabditis elegans
Exon40798   318   II: 1311605-1311922 Caenorhabditis elegans
Exon40800   125   II: 1312440-1312564 Caenorhabditis elegans
Exon40802   176   II: 1312617-1312792 Caenorhabditis elegans
Exon40804   99   II: 1313166-1313264 Caenorhabditis elegans
Exon40806   400   II: 1315961-1316360 Caenorhabditis elegans
Exon40808   367   II: 1316838-1317204 Caenorhabditis elegans
Exon40810   127   II: 1318171-1318297 Caenorhabditis elegans
Exon40812   245   II: 1318377-1318621 Caenorhabditis elegans
Exon40814   454   II: 1318698-1319151 Caenorhabditis elegans
Exon40818   227   II: 1319752-1319978 Caenorhabditis elegans
Exon40820   60   II: 1320026-1320085 Caenorhabditis elegans
Exon40822   309   II: 1320129-1320437 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56D12.6a.1 1310515 1320437 1

1 Sequence

Length
3155

1 Sequence Ontology Term

Identifier Name Description
transcript