WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D12.6b.1 Sequence Name  F56D12.6b.1
Length (nt)  3093   Chromosome Location  II: 1311212-1320439
Chromosome . Primary Identifier  II Chromosome Location . Start  1311212
Chromosome Location . End  1320439 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D12.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018974 fcho-1 F56D12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D12.6b F56D12.6b 2856   II: 1311264-1311395

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56D12.6b.1 1311212 1320439 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40796   184   II: 1311212-1311395 Caenorhabditis elegans
Exon40799   318   II: 1311605-1311922 Caenorhabditis elegans
Exon40801   125   II: 1312440-1312564 Caenorhabditis elegans
Exon40803   176   II: 1312617-1312792 Caenorhabditis elegans
Exon40805   99   II: 1313166-1313264 Caenorhabditis elegans
Exon40807   400   II: 1315961-1316360 Caenorhabditis elegans
Exon40809   367   II: 1316838-1317204 Caenorhabditis elegans
Exon40811   127   II: 1318171-1318297 Caenorhabditis elegans
Exon40813   245   II: 1318377-1318621 Caenorhabditis elegans
Exon40815   454   II: 1318698-1319151 Caenorhabditis elegans
Exon40819   227   II: 1319752-1319978 Caenorhabditis elegans
Exon40821   60   II: 1320026-1320085 Caenorhabditis elegans
Exon40823   311   II: 1320129-1320439 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56D12.6b.1 1311212 1320439 1

1 Sequence

Length
3093

1 Sequence Ontology Term

Identifier Name Description
transcript