WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F56D12.4c Sequence Name  F56D12.4c
Length (nt)  1107   Chromosome Location  II: 1339699-1339810
Chromosome . Primary Identifier  II Chromosome Location . Start  1339699
Chromosome Location . End  1339810
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D12.4c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39161 JIP-1, isoform c 41.2 368 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00048689
WBRNAi00048692
WBRNAi00010659
WBRNAi00015811
WBRNAi00103184

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F56D12.4c 1339699 1339810 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002176 jip-1 F56D12.4 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F56D12.4c 1339699 1339810 1
CDS:F56D12.4c 1346070 1346336 1
CDS:F56D12.4c 1347329 1347410 1
CDS:F56D12.4c 1347471 1347547 1
CDS:F56D12.4c 1347596 1347703 1
CDS:F56D12.4c 1348497 1348705 1
CDS:F56D12.4c 1349481 1349560 1
CDS:F56D12.4c 1349617 1349715 1
CDS:F56D12.4c 1349963 1350035 1

1 Sequence

Length
1107

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F56D12.4c.1 F56D12.4c.1 1107   II: 1339699-1350035