WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y51H7C.5 Sequence Name  Y51H7C.5
Length (nt)  1080   Chromosome Location  II: 1412528-1412657
Chromosome . Primary Identifier  II Chromosome Location . Start  1412528
Chromosome Location . End  1412657
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51H7C.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45372 ALKB-1 40.9 359 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00057212
WBRNAi00057213
WBRNAi00114502
WBRNAi00114491
WBRNAi00114488
WBRNAi00114487
WBRNAi00114490
WBRNAi00114489

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y51H7C.5 1412528 1412657 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021783 alkb-1 Y51H7C.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y51H7C.5 1412528 1412657 1
CDS:Y51H7C.5 1413628 1413753 1
CDS:Y51H7C.5 1413799 1413888 1
CDS:Y51H7C.5 1414434 1414608 1
CDS:Y51H7C.5 1416016 1416139 1
CDS:Y51H7C.5 1416459 1416556 1
CDS:Y51H7C.5 1419729 1420065 1

1 Sequence

Length
1080

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y51H7C.5.1 Y51H7C.5.1 1448   II: 1412409-1420314