WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54A3.6a Sequence Name  F54A3.6a
Length (nt)  1413   Chromosome Location  II: 2225905-2226024
Chromosome . Primary Identifier  II Chromosome Location . Start  2225905
Chromosome Location . End  2226024
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54A3.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25902 F54A3.6, isoform a 52.7 470 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00048210
WBRNAi00048211
WBRNAi00058291
WBRNAi00032727

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54A3.6a 2225905 2226024 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018785 F54A3.6 F54A3.6 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54A3.6a 2225905 2226024 -1
CDS:F54A3.6a 2226938 2227271 -1
CDS:F54A3.6a 2229193 2229440 -1
CDS:F54A3.6a 2230411 2230542 -1
CDS:F54A3.6a 2230675 2230764 -1
CDS:F54A3.6a 2230829 2230867 -1
CDS:F54A3.6a 2231469 2231537 -1
CDS:F54A3.6a 2231693 2231761 -1
CDS:F54A3.6a 2231809 2231878 -1
CDS:F54A3.6a 2231922 2231976 -1
CDS:F54A3.6a 2232044 2232179 -1
CDS:F54A3.6a 2232229 2232257 -1
CDS:F54A3.6a 2232310 2232331 -1

1 Sequence

Length
1413

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54A3.6a.1 F54A3.6a.1 1651   II: 2225806-2232470