WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53G2.6a Sequence Name  F53G2.6a
Length (nt)  2490   Chromosome Location  II: 2461193-2461250
Chromosome . Primary Identifier  II Chromosome Location . Start  2461193
Chromosome Location . End  2461250
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53G2.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52898 TSR-1, isoform a 93.3 829 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00094359
WBRNAi00048179
WBRNAi00094132
WBRNAi00081963
WBRNAi00000239
WBRNAi00008837
WBRNAi00025601
WBRNAi00094384
WBRNAi00094475
WBRNAi00066339
WBRNAi00090960

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53G2.6a 2461193 2461250 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006647 tsr-1 F53G2.6 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53G2.6a 2461193 2461250 -1
CDS:F53G2.6a 2461795 2461898 -1
CDS:F53G2.6a 2462191 2462355 -1
CDS:F53G2.6a 2463080 2463331 -1
CDS:F53G2.6a 2463995 2464111 -1
CDS:F53G2.6a 2464190 2464395 -1
CDS:F53G2.6a 2465258 2465447 -1
CDS:F53G2.6a 2465639 2465857 -1
CDS:F53G2.6a 2466745 2466821 -1
CDS:F53G2.6a 2466876 2467015 -1
CDS:F53G2.6a 2467959 2468320 -1
CDS:F53G2.6a 2468912 2469052 -1
CDS:F53G2.6a 2469212 2469496 -1
CDS:F53G2.6a 2470860 2471033 -1

1 Sequence

Length
2490

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53G2.6a.1 F53G2.6a.1 3111   II: 2460842-2473370