WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y110A2AL.14.1 Sequence Name  Y110A2AL.14.1
Length (nt)  1114   Chromosome Location  II: 2889116-2894395
Chromosome . Primary Identifier  II Chromosome Location . Start  2889116
Chromosome Location . End  2894395 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A2AL.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005020 sqv-2 Y110A2AL.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y110A2AL.14 Y110A2AL.14 993   II: 2889222-2889303

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y110A2AL.14.1 2889116 2894395 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43862   188   II: 2889116-2889303 Caenorhabditis elegans
Exon43863   443   II: 2891084-2891526 Caenorhabditis elegans
Exon43864   347   II: 2892990-2893336 Caenorhabditis elegans
Exon43865   136   II: 2894260-2894395 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y110A2AL.14.1 2889116 2894395 -1

1 Sequence

Length
1114

1 Sequence Ontology Term

Identifier Name Description
transcript