WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T11F1.2a Sequence Name  T11F1.2a
Length (nt)  1131   Chromosome Location  II: 2956682-2956814
Chromosome . Primary Identifier  II Chromosome Location . Start  2956682
Chromosome Location . End  2956814
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T11F1.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51640 IRLD-48, isoform a 43.1 376 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00053106
WBRNAi00018587

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T11F1.2a 2956682 2956814 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020428 irld-48 T11F1.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T11F1.2a 2956682 2956814 1
CDS:T11F1.2a 2956866 2957066 1
CDS:T11F1.2a 2957111 2957397 1
CDS:T11F1.2a 2957555 2957702 1
CDS:T11F1.2a 2957781 2957989 1
CDS:T11F1.2a 2958039 2958191 1

1 Sequence

Length
1131

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T11F1.2a.1 T11F1.2a.1 1291   II: 2956224-2958191