WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0454.3 Sequence Name  B0454.3
Length (nt)  1008   Chromosome Location  II: 3048678-3048842
Chromosome . Primary Identifier  II Chromosome Location . Start  3048678
Chromosome Location . End  3048842
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0454.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25742 SRI-28 38.9 335 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00039069
WBRNAi00009782

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0454.3 3048678 3048842 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005540 sri-28 B0454.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0454.3 3048678 3048842 1
CDS:B0454.3 3048893 3049021 1
CDS:B0454.3 3049489 3049710 1
CDS:B0454.3 3049758 3049991 1
CDS:B0454.3 3050049 3050127 1
CDS:B0454.3 3050175 3050353 1

1 Sequence

Length
1008

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0454.3.1 B0454.3.1 1090   II: 3048678-3050435