WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10D4.6.1 Sequence Name  T10D4.6.1
Length (nt)  2427   Chromosome Location  II: 3119332-3123183
Chromosome . Primary Identifier  II Chromosome Location . Start  3119332
Chromosome Location . End  3123183 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10D4.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020408 T10D4.6 T10D4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10D4.6 T10D4.6 2334   II: 3119345-3119395

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10D4.6.1 3119332 3123183 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44334   64   II: 3119332-3119395 Caenorhabditis elegans
Exon44335   54   II: 3119506-3119559 Caenorhabditis elegans
Exon44336   57   II: 3119921-3119977 Caenorhabditis elegans
Exon44337   303   II: 3120024-3120326 Caenorhabditis elegans
Exon44338   195   II: 3120932-3121126 Caenorhabditis elegans
Exon44339   99   II: 3121166-3121264 Caenorhabditis elegans
Exon44340   333   II: 3121314-3121646 Caenorhabditis elegans
Exon44341   957   II: 3121767-3122723 Caenorhabditis elegans
Exon44342   60   II: 3122769-3122828 Caenorhabditis elegans
Exon44343   305   II: 3122879-3123183 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10D4.6.1 3119332 3123183 1

1 Sequence

Length
2427

1 Sequence Ontology Term

Identifier Name Description
transcript