WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17F4.6c.1 Sequence Name  C17F4.6c.1
Length (nt)  3564   Chromosome Location  II: 3251082-3259299
Chromosome . Primary Identifier  II Chromosome Location . Start  3251082
Chromosome Location . End  3259299 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17F4.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001544 gcy-19 C17F4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17F4.6c C17F4.6c 3564   II: 3251082-3251255

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17F4.6c.1 3251082 3259299 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44561   174   II: 3251082-3251255 Caenorhabditis elegans
Exon44564   153   II: 3251413-3251565 Caenorhabditis elegans
Exon44567   98   II: 3251649-3251746 Caenorhabditis elegans
Exon44570   203   II: 3252161-3252363 Caenorhabditis elegans
Exon44573   140   II: 3252423-3252562 Caenorhabditis elegans
Exon44576   124   II: 3252816-3252939 Caenorhabditis elegans
Exon44579   233   II: 3253136-3253368 Caenorhabditis elegans
Exon44582   86   II: 3253417-3253502 Caenorhabditis elegans
Exon44585   373   II: 3253674-3254046 Caenorhabditis elegans
Exon44588   370   II: 3254116-3254485 Caenorhabditis elegans
Exon44591   206   II: 3254937-3255142 Caenorhabditis elegans
Exon44594   128   II: 3255244-3255371 Caenorhabditis elegans
Exon44597   139   II: 3255467-3255605 Caenorhabditis elegans
Exon44600   126   II: 3255666-3255791 Caenorhabditis elegans
Exon44601   18   II: 3256201-3256218 Caenorhabditis elegans
Exon44604   89   II: 3256307-3256395 Caenorhabditis elegans
Exon44606   42   II: 3256576-3256617 Caenorhabditis elegans
Exon44610   123   II: 3257052-3257174 Caenorhabditis elegans
Exon44613   236   II: 3257235-3257470 Caenorhabditis elegans
Exon44616   133   II: 3257517-3257649 Caenorhabditis elegans
Exon44619   110   II: 3257695-3257804 Caenorhabditis elegans
Exon44622   131   II: 3258748-3258878 Caenorhabditis elegans
Exon44624   129   II: 3259171-3259299 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17F4.6c.1 3251082 3259299 -1

1 Sequence

Length
3564

1 Sequence Ontology Term

Identifier Name Description
transcript