WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C17F4.6c Sequence Name  C17F4.6c
Length (nt)  3564   Chromosome Location  II: 3251082-3251255
Chromosome . Primary Identifier  II Chromosome Location . Start  3251082
Chromosome Location . End  3251255
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17F4.6c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52552 GCY-19, isoform c 132.8 1187 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00040825
WBRNAi00010922
WBRNAi00095447

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C17F4.6c 3251082 3251255 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001544 gcy-19 C17F4.6 Caenorhabditis elegans

23 Locations


Feature . Primary Identifier
Start End Strand
CDS:C17F4.6c 3251082 3251255 -1
CDS:C17F4.6c 3251413 3251565 -1
CDS:C17F4.6c 3251649 3251746 -1
CDS:C17F4.6c 3252161 3252363 -1
CDS:C17F4.6c 3252423 3252562 -1
CDS:C17F4.6c 3252816 3252939 -1
CDS:C17F4.6c 3253136 3253368 -1
CDS:C17F4.6c 3253417 3253502 -1
CDS:C17F4.6c 3253674 3254046 -1
CDS:C17F4.6c 3254116 3254485 -1
CDS:C17F4.6c 3254937 3255142 -1
CDS:C17F4.6c 3255244 3255371 -1
CDS:C17F4.6c 3255467 3255605 -1
CDS:C17F4.6c 3255666 3255791 -1
CDS:C17F4.6c 3256201 3256218 -1
CDS:C17F4.6c 3256307 3256395 -1
CDS:C17F4.6c 3256576 3256617 -1
CDS:C17F4.6c 3257052 3257174 -1
CDS:C17F4.6c 3257235 3257470 -1
CDS:C17F4.6c 3257517 3257649 -1
CDS:C17F4.6c 3257695 3257804 -1
CDS:C17F4.6c 3258748 3258878 -1
CDS:C17F4.6c 3259171 3259299 -1

1 Sequence

Length
3564

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C17F4.6c.1 C17F4.6c.1 3564   II: 3251082-3259299